Gene

cldni

ID

ZDB-GENE-010328-9

Name

claudin i

Symbol

cldni Nomenclature History

Previous Names

cldn32 (1)
etID38174.3 (1)
fb52b12
wu:fb52b12 (1)

Type

protein_coding_gene

Location

Chr: 3 Mapping Details/Browsers

Description

Predicted to have structural molecule activity. Predicted to localize to bicellular tight junction; integral component of membrane; and plasma membrane. Is expressed in several structures, including integument; ovary; periderm; visual system; and yolk syncytial layer. Orthologous to human CLDN17 (claudin 17); CLDN6 (claudin 6); and CLDN9 (claudin 9).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

17 figures from 4 publications

Cross-Species Comparison

High Throughput Data

GEO (1)

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Thisse Expression Data

MGC:56243 (14 images)
eu65 (10 images)

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With cldni Human Ortholog

No data available

Associated With cldni Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Conserved_site	IPR017974	Claudin, conserved site
Family	IPR004031	PMP-22/EMP/MP20/Claudin
Family	IPR006187	Claudin

Domain Details Per Protein

Protein	Length	Claudin	Claudin, conserved site	PMP-22/EMP/MP20/Claudin
UniProtKB:Q90XR6 InterPro	211

Transcripts

Genome Browsers

Type	Name	Annotation Method	Has Havana Data	Length (nt)	Analysis
mRNA	cldni-201 (1) Ensembl	Ensembl		1,793 nt	Select Tool ZFIN BLAST
mRNA	cldni-202 (1) Ensembl	Ensembl		2,212 nt	Select Tool ZFIN BLAST

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations