Gene
hoxb5b
- ID
- ZDB-GENE-000823-6
- Name
- homeobox B5b
- Symbol
- hoxb5b Nomenclature History
- Previous Names
- Type
- protein_coding_gene
- Location
- Chr: 12 Mapping Details/Browsers
- Description
- Predicted to have DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Involved in brain development; cardioblast differentiation; and cell fate specification. Predicted to localize to nucleus. Is expressed in several structures, including mesoderm; nervous system; otic vesicle; pharyngeal arch; and pronephric duct. Orthologous to human HOXB5 (homeobox B5).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 18 figures from 13 publications
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
Type | InterPro ID | Name |
---|---|---|
Conserved_site | IPR001827 | Homeobox protein, antennapedia type, conserved site |
Conserved_site | IPR017970 | Homeobox, conserved site |
Domain | IPR001356 | Homeodomain |
Domain | IPR020479 | Homeodomain, metazoa |
Family | IPR017995 | Homeobox protein, antennapedia type |
Family | IPR050296 | Antennapedia-type homeobox |
Homologous_superfamily | IPR009057 | Homedomain-like superfamily |
Domain Details Per Protein
Protein | Length | Antennapedia-type homeobox | Homedomain-like superfamily | Homeobox, conserved site | Homeobox protein, antennapedia type | Homeobox protein, antennapedia type, conserved site | Homeodomain | Homeodomain, metazoa |
---|---|---|---|---|---|---|---|---|
UniProtKB:A0A0R4I9D0
|
276 | |||||||
UniProtKB:P09013
|
276 |
Type | Name | Annotation Method | Length (nt) | Analysis |
---|---|---|---|---|
mRNA |
hoxb5b-201
(1)
|
Havana | 1626 nt | |
mRNA | ottdart00000001797 (1) | Havana | 1356 nt |
Interactions and Pathways
No data available
Plasmids
No data available