Genomic Feature

zy51

ID
ZDB-ALT-170918-19
Name
zy51
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with
Lab of Origin
Yost Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Genome Build: GRCz11Chromosome: 17
Variants
Variant Type
Small Deletion
Variant Location
Chr 17: 4245239 - 4245246 (GRCz11) (1) Details
Nucleotide change
CAGGAGAA/-
Variant Notes
premature stop in the pro-domain of Gdf3
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
8 bp deleted in Exon 1 (1)
Transcript Consequence
Frameshift, Premature Stop (2)
Protein Consequence
None
Sequences
Flanking Sequence
GTGTTGATGGTGAAAAAAGAAATTCTATAAATTGTCCTTTCTTAATACATGGACTTGCTCAACATGTGATGGCTTCATATATATCCCCAATGACTCTTTATAAAAATGCATTTTCCAAATAAAATAAATAAATAATTATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATAAAATGTAAACATTTTATTATAAATAAATAAATTATAAATAGTCACTTTTTAAGTGTGGTCCGTAAGATCCTCACCTTGATCCTGCATAAACCTCACGATGTTTCCTCGTACCCCATATTCAGACACCACACATGGGTCATTAACGGTCTGTTTGCTGGCCTGTTTAAAGATTTTCCACATCTGTGATGGCACTGCGGCATGATGCGATGGTTTGGGTCGACTCCAGAGTCCCATAGAGCTCAAAAACAGCTTTTCTTGCACAAGACCATCATCTTCTG
CAGGAGAA/- CAGAGACTGAGGGTCAGAAGACAGGCTCTGAGGAGGACCAAGAACATTATTAGATTATAAAAACAGAGCAAAGAACACACACAGGCTTATAAATGCCAGCTGATCAGCTTCACATGGCCAGAAATCCACATCTGCAAGCTGATTGGTGGAGATAAAGGAGTTGATTGATCAGCAGCAGGGGGTGGTGTCATTCACATGCAAATCAGCTCTTTGATGTTTATAGGCATCAGGTTGCCTGGCAGACACAGCTCTGATTTATTGCATGAAGATTTTGGGATCTGCAATGATTTAATAATTAAAATGAGTAGGGGAAAATGCTAAAAATGACTTTTTTATTTGCTTTTTTATTTTATTTTATGAGGGTGATCTGTTTTTTTTTTTTATTTAATTATGACAAAATATTTATATACCGCTACAGACAAAACACTGCAAGTCTCAGTTTTACTGATTTCTGTTTATAAAGGCATCAAATTGACAAGAAAACACACTGATCTGATTTA
Additional Sequence
None
Fish
Fish Genomic Feature Zygosity Parental Zygosity Affected Genomic Regions Phenotype Gene Expression
gdf3zy51/zy51 (AB)Homozygous♀+/- ♂+/-Fig. 1 with image from Bisgrove et al., 2017
gdf3zy51/zy51 (AB)Homozygous♀-/-2 figures with image from Bisgrove et al., 20173 figures with image from Bisgrove et al., 2017
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Supplemental Information
Genotyping protocol
None
Citations
TSV
1 - 1 of 1
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